Export your current network:
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
| node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
| LOC111217171 | abt1 | ENSSDUP00000028772 | ENSSDUP00000026694 | RNA binding motif protein 14a. | Activator of basal transcription 1. | 0.772 |
| LOC111217171 | cebpz | ENSSDUP00000028772 | ENSSDUP00000017816 | RNA binding motif protein 14a. | CCAAT enhancer binding protein zeta. | 0.696 |
| LOC111217171 | fbl | ENSSDUP00000028772 | ENSSDUP00000005550 | RNA binding motif protein 14a. | Fibrillarin. | 0.932 |
| LOC111217171 | gar1 | ENSSDUP00000028772 | ENSSDUP00000002798 | RNA binding motif protein 14a. | H/ACA ribonucleoprotein complex subunit; Required for ribosome biogenesis. Part of a complex which catalyzes pseudouridylation of rRNA. This involves the isomerization of uridine such that the ribose is subsequently attached to C5, instead of the normal N1. Pseudouridine ("psi") residues may serve to stabilize the conformation of rRNAs. | 0.714 |
| LOC111217171 | gnl3 | ENSSDUP00000028772 | ENSSDUP00000001207 | RNA binding motif protein 14a. | Guanine nucleotide binding protein-like 3 (nucleolar). | 0.711 |
| LOC111217171 | gnl3l | ENSSDUP00000028772 | ENSSDUP00000017953 | RNA binding motif protein 14a. | Guanine nucleotide binding protein-like 3 (nucleolar)-like. | 0.711 |
| LOC111217171 | mrto4 | ENSSDUP00000028772 | ENSSDUP00000021128 | RNA binding motif protein 14a. | Ribosome assembly factor mrt4; Component of the ribosome assembly machinery. Nuclear paralog of the ribosomal protein P0, it binds pre-60S subunits at an early stage of assembly in the nucleolus, and is replaced by P0 in cytoplasmic pre-60S subunits and mature 80S ribosomes. | 0.745 |
| LOC111217171 | noc3l | ENSSDUP00000028772 | ENSSDUP00000020523 | RNA binding motif protein 14a. | Nucleolar complex protein 3 homolog. | 0.750 |
| LOC111217171 | nop56 | ENSSDUP00000028772 | ENSSDUP00000031332 | RNA binding motif protein 14a. | NOP56 ribonucleoprotein homolog. | 0.940 |
| LOC111217171 | nop58 | ENSSDUP00000028772 | ENSSDUP00000011026 | RNA binding motif protein 14a. | NOP58 ribonucleoprotein homolog (yeast). | 0.857 |
| abt1 | LOC111217171 | ENSSDUP00000026694 | ENSSDUP00000028772 | Activator of basal transcription 1. | RNA binding motif protein 14a. | 0.772 |
| abt1 | cebpz | ENSSDUP00000026694 | ENSSDUP00000017816 | Activator of basal transcription 1. | CCAAT enhancer binding protein zeta. | 0.493 |
| abt1 | gnl3 | ENSSDUP00000026694 | ENSSDUP00000001207 | Activator of basal transcription 1. | Guanine nucleotide binding protein-like 3 (nucleolar). | 0.414 |
| abt1 | gnl3l | ENSSDUP00000026694 | ENSSDUP00000017953 | Activator of basal transcription 1. | Guanine nucleotide binding protein-like 3 (nucleolar)-like. | 0.414 |
| abt1 | nop58 | ENSSDUP00000026694 | ENSSDUP00000011026 | Activator of basal transcription 1. | NOP58 ribonucleoprotein homolog (yeast). | 0.776 |
| cebpz | LOC111217171 | ENSSDUP00000017816 | ENSSDUP00000028772 | CCAAT enhancer binding protein zeta. | RNA binding motif protein 14a. | 0.696 |
| cebpz | abt1 | ENSSDUP00000017816 | ENSSDUP00000026694 | CCAAT enhancer binding protein zeta. | Activator of basal transcription 1. | 0.493 |
| cebpz | fbl | ENSSDUP00000017816 | ENSSDUP00000005550 | CCAAT enhancer binding protein zeta. | Fibrillarin. | 0.859 |
| cebpz | gar1 | ENSSDUP00000017816 | ENSSDUP00000002798 | CCAAT enhancer binding protein zeta. | H/ACA ribonucleoprotein complex subunit; Required for ribosome biogenesis. Part of a complex which catalyzes pseudouridylation of rRNA. This involves the isomerization of uridine such that the ribose is subsequently attached to C5, instead of the normal N1. Pseudouridine ("psi") residues may serve to stabilize the conformation of rRNAs. | 0.615 |
| cebpz | gnl3 | ENSSDUP00000017816 | ENSSDUP00000001207 | CCAAT enhancer binding protein zeta. | Guanine nucleotide binding protein-like 3 (nucleolar). | 0.898 |
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