STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSSDUP00000028868Uncharacterized protein. (342 aa)    
Predicted Functional Partners:
ENSSDUP00000032773
Uncharacterized protein.
 
      0.899
Clip1
Uncharacterized protein.
 
      0.726
mapre1
Microtubule-associated protein, RP/EB family, member 1b.
    
 
 0.613
ENSSDUP00000001884
Kinesin motor domain-containing protein; Belongs to the TRAFAC class myosin-kinesin ATPase superfamily. Kinesin family.
    
 
 0.602
kif17
Kinesin-like protein; Belongs to the TRAFAC class myosin-kinesin ATPase superfamily. Kinesin family.
    
 
 0.602
LOC111225476
Dynactin 1b.
    
 
0.601
LOC111231327
Dynactin 1a.
    
 
0.601
LOC111238444
Microtubule-associated protein, RP/EB family, member 3b.
    
 
 0.578
LOC111225365
Microtubule-associated protein, RP/EB family, member 3a.
    
 
 0.578
mapre2
Microtubule-associated protein, RP/EB family, member 2.
    
 
 0.578
Your Current Organism:
Seriola dumerili
NCBI taxonomy Id: 41447
Other names: S. dumerili, greater amberjack
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