STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC111222294Endothelial cell adhesion molecule a. (455 aa)    
Predicted Functional Partners:
LOC111239344
Endothelial cell adhesion molecule b.
  
  
 
0.901
LOC111237711
Claudin; Plays a major role in tight junction-specific obliteration of the intercellular space, through calcium-independent cell-adhesion activity; Belongs to the claudin family.
   
  
 0.738
LOC111224279
Claudin; Plays a major role in tight junction-specific obliteration of the intercellular space, through calcium-independent cell-adhesion activity; Belongs to the claudin family.
   
  
 0.738
cdh5
Cadherin 5; Cadherins are calcium-dependent cell adhesion proteins.
   
  
 0.613
LOC111217926
Si:dkey-237i9.8.
  
  
 0.505
egfl7
EGF-like-domain, multiple 7.
   
 
 0.439
LOC111218446
TNF superfamily member 11; Belongs to the tumor necrosis factor family.
  
   
 0.426
dcbld2
Discoidin, CUB and LCCL domain containing 2.
      
 0.418
LOC111238329
Tight junction protein 1a; Belongs to the MAGUK family.
      
 0.418
LOC111229539
Tight junction protein 1b; Belongs to the MAGUK family.
      
 0.418
Your Current Organism:
Seriola dumerili
NCBI taxonomy Id: 41447
Other names: S. dumerili, greater amberjack
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.