STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC111231296Uncharacterized protein. (999 aa)    
Predicted Functional Partners:
dnttip1
Ubiquitin-conjugating enzyme E2C.
    
 
 0.826
ccdc51
Coiled-coil domain containing 51.
      
 0.634
LOC111217237
Uncharacterized protein.
  
   
 0.531
LOC111216396
ELM2 and Myb/SANT-like domain containing 1a.
    
 
0.529
Znf831
Uncharacterized protein.
  
 
 
 0.529
LOC111225750
ELM2 and Myb/SANT-like domain containing 1b.
    
 
0.529
LOC111225066
Uncharacterized protein.
  
 
   0.528
LOC111232561
Uncharacterized protein.
  
     0.504
LOC111233120
Uncharacterized protein.
  
     0.502
pou2af1
Uncharacterized protein.
      
 0.499
Your Current Organism:
Seriola dumerili
NCBI taxonomy Id: 41447
Other names: S. dumerili, greater amberjack
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.