STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC111229576Uncharacterized protein; Belongs to the MIP/aquaporin (TC 1.A.8) family. (295 aa)    
Predicted Functional Partners:
gk5
Glycerol kinase 5; Belongs to the FGGY kinase family.
 
 
 0.600
ppp1r21
Protein phosphatase 1, regulatory subunit 21.
    
   0.580
exosc8
Exosome component 8.
    
   0.580
wtap
WT1 associated protein.
    
   0.580
gk
Uncharacterized protein; Belongs to the FGGY kinase family.
 
 
 0.579
LOC111218160
Uncharacterized protein; Belongs to the FGGY kinase family.
 
 
 0.546
fggy
FGGY carbohydrate kinase domain containing.
  
 
 0.546
shpk
Sedoheptulokinase.
  
 
 0.546
katnal2
Katanin p60 ATPase-containing subunit A-like 2; Severs microtubules in vitro in an ATP-dependent manner. This activity may promote rapid reorganization of cellular microtubule arrays.
  
 0.539
gpd2
Glycerol-3-phosphate dehydrogenase 2 (mitochondrial).
 
  
 0.521
Your Current Organism:
Seriola dumerili
NCBI taxonomy Id: 41447
Other names: S. dumerili, greater amberjack
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.