STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ppp1r14bProtein phosphatase 1, regulatory (inhibitor) subunit 14Bb. (134 aa)    
Predicted Functional Partners:
map2k5
Mitogen-activated protein kinase kinase 5; Belongs to the protein kinase superfamily.
     
 0.596
tmem86a
Transmembrane protein 86A.
      
 0.521
ostf1
Osteoclast stimulating factor 1.
    
 0.479
neu4
Sialidase 4.
    
 0.464
tasp1
Taspase, threonine aspartase, 1.
      
 0.426
vac14
Vac14 homolog (S. cerevisiae).
      
 0.422
LOC111232170
Mitogen-activated protein kinase kinase 2a; Belongs to the protein kinase superfamily.
     
 0.401
map2k1
Mitogen-activated protein kinase kinase 1; Belongs to the protein kinase superfamily.
     
 0.401
LOC111229041
Mitogen-activated protein kinase kinase 2b.
     
 0.401
Your Current Organism:
Seriola dumerili
NCBI taxonomy Id: 41447
Other names: S. dumerili, greater amberjack
Server load: low (22%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.