Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
ENSSDUP00000008368 | shox2 | ENSSDUP00000008368 | ENSSDUP00000029588 | Uncharacterized protein. | Short stature homeobox 2. | 0.441 |
HCN4 | shox2 | ENSSDUP00000030251 | ENSSDUP00000029588 | Hyperpolarization activated cyclic nucleotide gated potassium channel 4. | Short stature homeobox 2. | 0.473 |
LOC111221325 | shox2 | ENSSDUP00000007466 | ENSSDUP00000029588 | Hyperpolarization activated cyclic nucleotide-gated potassium channel 4. | Short stature homeobox 2. | 0.473 |
LOC111229281 | shox2 | ENSSDUP00000001561 | ENSSDUP00000029588 | LIM-domain binding 1b. | Short stature homeobox 2. | 0.402 |
LOC111237786 | shox2 | ENSSDUP00000006027 | ENSSDUP00000029588 | T-box transcription factor 5a. | Short stature homeobox 2. | 0.462 |
LOC111240325 | shox2 | ENSSDUP00000010425 | ENSSDUP00000029588 | T-box transcription factor 18. | Short stature homeobox 2. | 0.620 |
banp | shox2 | ENSSDUP00000024373 | ENSSDUP00000029588 | BTG3 associated nuclear protein. | Short stature homeobox 2. | 0.418 |
rsrc1 | shox2 | ENSSDUP00000029573 | ENSSDUP00000029588 | Arginine/serine-rich coiled-coil 1. | Short stature homeobox 2. | 0.418 |
shox2 | ENSSDUP00000008368 | ENSSDUP00000029588 | ENSSDUP00000008368 | Short stature homeobox 2. | Uncharacterized protein. | 0.441 |
shox2 | HCN4 | ENSSDUP00000029588 | ENSSDUP00000030251 | Short stature homeobox 2. | Hyperpolarization activated cyclic nucleotide gated potassium channel 4. | 0.473 |
shox2 | LOC111221325 | ENSSDUP00000029588 | ENSSDUP00000007466 | Short stature homeobox 2. | Hyperpolarization activated cyclic nucleotide-gated potassium channel 4. | 0.473 |
shox2 | LOC111229281 | ENSSDUP00000029588 | ENSSDUP00000001561 | Short stature homeobox 2. | LIM-domain binding 1b. | 0.402 |
shox2 | LOC111237786 | ENSSDUP00000029588 | ENSSDUP00000006027 | Short stature homeobox 2. | T-box transcription factor 5a. | 0.462 |
shox2 | LOC111240325 | ENSSDUP00000029588 | ENSSDUP00000010425 | Short stature homeobox 2. | T-box transcription factor 18. | 0.620 |
shox2 | banp | ENSSDUP00000029588 | ENSSDUP00000024373 | Short stature homeobox 2. | BTG3 associated nuclear protein. | 0.418 |
shox2 | rsrc1 | ENSSDUP00000029588 | ENSSDUP00000029573 | Short stature homeobox 2. | Arginine/serine-rich coiled-coil 1. | 0.418 |
shox2 | tbx15 | ENSSDUP00000029588 | ENSSDUP00000019551 | Short stature homeobox 2. | T-box transcription factor 15. | 0.419 |
shox2 | tbx3 | ENSSDUP00000029588 | ENSSDUP00000005976 | Short stature homeobox 2. | T-box transcription factor 3a. | 0.441 |
tbx15 | shox2 | ENSSDUP00000019551 | ENSSDUP00000029588 | T-box transcription factor 15. | Short stature homeobox 2. | 0.419 |
tbx3 | shox2 | ENSSDUP00000005976 | ENSSDUP00000029588 | T-box transcription factor 3a. | Short stature homeobox 2. | 0.441 |