STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
srsf7Serine and arginine rich splicing factor 7b. (222 aa)    
Predicted Functional Partners:
nxf1
Zgc:153681.
   
 0.954
LOC111221705
SRSF protein kinase 1b.
    
 0.916
SRSF3
Serine and arginine rich splicing factor 3b.
   
0.906
LOC111222859
RRM domain-containing protein.
   
0.906
LOC111234408
Uncharacterized protein.
   
0.888
ENSSDUP00000005354
RRM domain-containing protein.
   
 0.888
LOC111232243
Serine and arginine rich splicing factor 1a.
   
0.888
LOC111234256
Serine and arginine rich splicing factor 9.
   
0.887
LOC111219724
Serine and arginine rich splicing factor 2a.
   
0.842
LOC111230261
RRM domain-containing protein.
   
0.842
Your Current Organism:
Seriola dumerili
NCBI taxonomy Id: 41447
Other names: S. dumerili, greater amberjack
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.