STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC111225244Si:ch211-212o1.2. (283 aa)    
Predicted Functional Partners:
selenoi
Selenoprotein I; Belongs to the CDP-alcohol phosphatidyltransferase class-I family.
     
 0.903
cept1
Choline/ethanolamine phosphotransferase 1b; Belongs to the CDP-alcohol phosphatidyltransferase class-I family.
     
 0.903
LOC111235131
Transmembrane protein 189.
  
  
 
0.901
LOC111216991
Phospholipase D family, member 3.
     
  0.900
LOC111238302
Phospholipase.
     
  0.900
PLD4
Phospholipase D family member 4.
     
  0.900
LOC111225732
Phospholipase.
     
  0.900
LOC111234313
Phospholipase.
     
  0.900
lpcat4
Lysophosphatidylcholine acyltransferase 4.
     
  0.900
ENSSDUP00000009749
Ubiquitin-like domain-containing protein.
    
 0.665
Your Current Organism:
Seriola dumerili
NCBI taxonomy Id: 41447
Other names: S. dumerili, greater amberjack
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.