STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC111219498Mov10 RISC complex RNA helicase a. (1006 aa)    
Predicted Functional Partners:
piwil2
Piwi-like RNA-mediated gene silencing 2; Belongs to the argonaute family.
   
 0.647
asz1
Ankyrin repeat, SAM and basic leucine zipper domain containing 1.
   
 0.617
piwil1
Piwi-like RNA-mediated gene silencing 1; Belongs to the argonaute family.
   
 0.592
tdrd12
Tudor domain containing 12.
    
 0.538
tdrd5
Uncharacterized protein.
    
 0.468
ddx10
RNA helicase.
    
 0.452
pld6
Phospholipase D family, member 6.
    
 
 0.448
fkbp6
Peptidylprolyl isomerase.
   
 0.442
tdrd9
Tudor domain containing 9.
    
 0.432
ENSSDUP00000005962
Si:dkeyp-93d12.1.
   
 0.404
Your Current Organism:
Seriola dumerili
NCBI taxonomy Id: 41447
Other names: S. dumerili, greater amberjack
Server load: low (22%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.