STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
spryd4SPRY domain containing 4. (266 aa)    
Predicted Functional Partners:
tmem192
Transmembrane protein 192.
   
  0.663
gtpbp8
GTP binding protein 8 (putative).
   
  
 0.601
LOC111218118
G protein-coupled receptor 89B.
      
 0.581
yeats4
YEATS domain containing 4.
      
 0.565
ankrd46
Ankyrin repeat domain 46b.
    
 0.482
LOC111218247
Uncharacterized protein; Belongs to the beta/gamma-crystallin family.
  
     0.404
Your Current Organism:
Seriola dumerili
NCBI taxonomy Id: 41447
Other names: S. dumerili, greater amberjack
Server load: low (18%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.