STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
nrxn3Uncharacterized protein. (1598 aa)    
Predicted Functional Partners:
CASK
Calcium/calmodulin dependent serine protein kinase; Belongs to the MAGUK family.
    
 0.764
CASK-2
Calcium/calmodulin dependent serine protein kinase; Belongs to the MAGUK family.
    
 0.764
Lrrtm2
Leucine rich repeat transmembrane neuronal 2.
   
 0.688
nlgn1
Neuroligin 1.
   
 0.672
LOC111233043
Neuroligin 4 X-linked a.
   
 0.616
nlgn3
Neuroligin 3a.
   
 0.610
LOC111234325
Neuroligin 3b.
   
 0.610
nlgn2
Neuroligin 2a.
   
 0.571
LOC111222150
Neuroligin 2b.
   
 0.571
lrrtm1
Leucine rich repeat transmembrane neuronal 1.
   
 0.558
Your Current Organism:
Seriola dumerili
NCBI taxonomy Id: 41447
Other names: S. dumerili, greater amberjack
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.