STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSSDUP00000030597Ciliary rootlet coiled-coil, rootletin family member 2. (1607 aa)    
Predicted Functional Partners:
plk2
Serine/threonine-protein kinase PLK.
   
 0.687
PLK1
Serine/threonine-protein kinase PLK.
   
 0.687
plk3
Serine/threonine-protein kinase PLK.
   
 0.687
bora
Bora aurora kinase A activator.
   
 
 0.606
ntan1
Uncharacterized protein.
      
 0.535
haus3
HAUS augmin-like complex, subunit 3.
   
 
 0.534
LOC111232562
Aurora kinase B; Belongs to the protein kinase superfamily.
   
 0.511
aurka
Aurora kinase A; Belongs to the protein kinase superfamily.
   
 0.511
LOC111227593
Cyclin-dependent kinase 11B.
   
 
  0.500
cdk10
Cyclin-dependent kinase 10; Belongs to the protein kinase superfamily.
   
 
  0.500
Your Current Organism:
Seriola dumerili
NCBI taxonomy Id: 41447
Other names: S. dumerili, greater amberjack
Server load: low (20%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.