STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSSDUP00000030776Ribonuclease P protein subunit p20; Component of ribonuclease P, a ribonucleoprotein complex that generates mature tRNA molecules by cleaving their 5'-ends. Also a component of the MRP ribonuclease complex, which cleaves pre-rRNA sequences. (147 aa)    
Predicted Functional Partners:
pop5
Ribonuclease P/MRP protein subunit POP5; Component of ribonuclease P, a protein complex that generates mature tRNA molecules by cleaving their 5'-ends.
    
 0.887
pop4
POP4 homolog, ribonuclease P/MRP subunit.
    
 0.740
LOC111219195
Ribonuclease P and MRP subunit p25, b.
   
 0.720
LOC111238392
LIM domain-containing protein.
   
 0.710
POP1
POP1 homolog, ribonuclease P/MRP subunit.
    
 0.710
LOC111218163
LIM domain-containing protein.
   
 0.710
LOC111226348
Uncharacterized protein.
    
  0.709
ENSSDUP00000030283
Alba domain-containing protein.
   
 0.657
rpp30
Ribonuclease P/MRP 30 subunit.
    
 0.616
arhgef6
Rac/Cdc42 guanine nucleotide exchange factor (GEF) 6.
   
 0.491
Your Current Organism:
Seriola dumerili
NCBI taxonomy Id: 41447
Other names: S. dumerili, greater amberjack
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.