Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
limd2 | med14 | ENSSDUP00000030845 | ENSSDUP00000014006 | LIM domain containing 2. | Mediator of RNA polymerase II transcription subunit 14; Component of the Mediator complex, a coactivator involved in the regulated transcription of nearly all RNA polymerase II-dependent genes. Mediator functions as a bridge to convey information from gene- specific regulatory proteins to the basal RNA polymerase II transcription machinery. Mediator is recruited to promoters by direct interactions with regulatory proteins and serves as a scaffold for the assembly of a functional preinitiation complex with RNA polymerase II and the general transcription factors. | 0.610 |
limd2 | mrpl35 | ENSSDUP00000030845 | ENSSDUP00000001393 | LIM domain containing 2. | Mitochondrial ribosomal protein L35. | 0.455 |
limd2 | mrps11 | ENSSDUP00000030845 | ENSSDUP00000011601 | LIM domain containing 2. | Mitochondrial ribosomal protein S11; Belongs to the universal ribosomal protein uS11 family. | 0.432 |
limd2 | mtrf1 | ENSSDUP00000030845 | ENSSDUP00000031437 | LIM domain containing 2. | Mitochondrial translational release factor 1. | 0.416 |
limd2 | tmem160 | ENSSDUP00000030845 | ENSSDUP00000007366 | LIM domain containing 2. | Transmembrane protein 160. | 0.430 |
med14 | limd2 | ENSSDUP00000014006 | ENSSDUP00000030845 | Mediator of RNA polymerase II transcription subunit 14; Component of the Mediator complex, a coactivator involved in the regulated transcription of nearly all RNA polymerase II-dependent genes. Mediator functions as a bridge to convey information from gene- specific regulatory proteins to the basal RNA polymerase II transcription machinery. Mediator is recruited to promoters by direct interactions with regulatory proteins and serves as a scaffold for the assembly of a functional preinitiation complex with RNA polymerase II and the general transcription factors. | LIM domain containing 2. | 0.610 |
mrpl35 | limd2 | ENSSDUP00000001393 | ENSSDUP00000030845 | Mitochondrial ribosomal protein L35. | LIM domain containing 2. | 0.455 |
mrpl35 | mrps11 | ENSSDUP00000001393 | ENSSDUP00000011601 | Mitochondrial ribosomal protein L35. | Mitochondrial ribosomal protein S11; Belongs to the universal ribosomal protein uS11 family. | 0.942 |
mrpl35 | mtrf1 | ENSSDUP00000001393 | ENSSDUP00000031437 | Mitochondrial ribosomal protein L35. | Mitochondrial translational release factor 1. | 0.777 |
mrps11 | limd2 | ENSSDUP00000011601 | ENSSDUP00000030845 | Mitochondrial ribosomal protein S11; Belongs to the universal ribosomal protein uS11 family. | LIM domain containing 2. | 0.432 |
mrps11 | mrpl35 | ENSSDUP00000011601 | ENSSDUP00000001393 | Mitochondrial ribosomal protein S11; Belongs to the universal ribosomal protein uS11 family. | Mitochondrial ribosomal protein L35. | 0.942 |
mrps11 | mtrf1 | ENSSDUP00000011601 | ENSSDUP00000031437 | Mitochondrial ribosomal protein S11; Belongs to the universal ribosomal protein uS11 family. | Mitochondrial translational release factor 1. | 0.851 |
mtrf1 | limd2 | ENSSDUP00000031437 | ENSSDUP00000030845 | Mitochondrial translational release factor 1. | LIM domain containing 2. | 0.416 |
mtrf1 | mrpl35 | ENSSDUP00000031437 | ENSSDUP00000001393 | Mitochondrial translational release factor 1. | Mitochondrial ribosomal protein L35. | 0.777 |
mtrf1 | mrps11 | ENSSDUP00000031437 | ENSSDUP00000011601 | Mitochondrial translational release factor 1. | Mitochondrial ribosomal protein S11; Belongs to the universal ribosomal protein uS11 family. | 0.851 |
tmem160 | limd2 | ENSSDUP00000007366 | ENSSDUP00000030845 | Transmembrane protein 160. | LIM domain containing 2. | 0.430 |