STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
hsp90b1Heat shock protein 90, beta (grp94), member 1. (797 aa)    
Predicted Functional Partners:
hspa5
Heat shock protein 5; Belongs to the heat shock protein 70 family.
   
 0.988
pdia6
Protein disulfide isomerase family A, member 6; Belongs to the protein disulfide isomerase family.
   
 0.972
dnajc10
DnaJ (Hsp40) homolog, subfamily C, member 10.
  
 0.968
dnajb11
DnaJ heat shock protein family (Hsp40) member B11.
  
 0.966
LOC111222069
Calreticulin.
   
 0.944
LOC111231152
Calreticulin.
   
 0.944
LOC111231847
Calreticulin.
   
 0.944
hyou1
Hypoxia up-regulated 1.
   
 0.944
ripk2
Receptor-interacting serine-threonine kinase 2.
   
 0.924
LOC111217911
Uncharacterized protein.
   
 
 0.903
Your Current Organism:
Seriola dumerili
NCBI taxonomy Id: 41447
Other names: S. dumerili, greater amberjack
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.