Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
LOC111234889 | stk11ip | ENSSDUP00000006019 | ENSSDUP00000031100 | Zinc finger and BTB domain containing 48. | Serine/threonine kinase 11 interacting protein. | 0.596 |
SPPL2A | stk11ip | ENSSDUP00000005825 | ENSSDUP00000031100 | Signal peptide peptidase like 2A. | Serine/threonine kinase 11 interacting protein. | 0.535 |
dus3l | impad1 | ENSSDUP00000018533 | ENSSDUP00000004009 | tRNA-dihydrouridine(47) synthase [NAD(P)(+)]. | Inositol monophosphatase domain containing 1. | 0.500 |
dus3l | kyat1 | ENSSDUP00000018533 | ENSSDUP00000010834 | tRNA-dihydrouridine(47) synthase [NAD(P)(+)]. | Kynurenine aminotransferase 1. | 0.411 |
dus3l | kyat3 | ENSSDUP00000018533 | ENSSDUP00000030988 | tRNA-dihydrouridine(47) synthase [NAD(P)(+)]. | Kynurenine aminotransferase 3. | 0.411 |
dus3l | stk11ip | ENSSDUP00000018533 | ENSSDUP00000031100 | tRNA-dihydrouridine(47) synthase [NAD(P)(+)]. | Serine/threonine kinase 11 interacting protein. | 0.487 |
hemk1 | n6amt1 | ENSSDUP00000001063 | ENSSDUP00000007251 | HemK methyltransferase family member 1. | N-6 adenine-specific DNA methyltransferase 1. | 0.653 |
hemk1 | stk11ip | ENSSDUP00000001063 | ENSSDUP00000031100 | HemK methyltransferase family member 1. | Serine/threonine kinase 11 interacting protein. | 0.459 |
impad1 | dus3l | ENSSDUP00000004009 | ENSSDUP00000018533 | Inositol monophosphatase domain containing 1. | tRNA-dihydrouridine(47) synthase [NAD(P)(+)]. | 0.500 |
impad1 | stk11ip | ENSSDUP00000004009 | ENSSDUP00000031100 | Inositol monophosphatase domain containing 1. | Serine/threonine kinase 11 interacting protein. | 0.487 |
kyat1 | dus3l | ENSSDUP00000010834 | ENSSDUP00000018533 | Kynurenine aminotransferase 1. | tRNA-dihydrouridine(47) synthase [NAD(P)(+)]. | 0.411 |
kyat1 | kyat3 | ENSSDUP00000010834 | ENSSDUP00000030988 | Kynurenine aminotransferase 1. | Kynurenine aminotransferase 3. | 0.902 |
kyat1 | stk11ip | ENSSDUP00000010834 | ENSSDUP00000031100 | Kynurenine aminotransferase 1. | Serine/threonine kinase 11 interacting protein. | 0.463 |
kyat3 | dus3l | ENSSDUP00000030988 | ENSSDUP00000018533 | Kynurenine aminotransferase 3. | tRNA-dihydrouridine(47) synthase [NAD(P)(+)]. | 0.411 |
kyat3 | kyat1 | ENSSDUP00000030988 | ENSSDUP00000010834 | Kynurenine aminotransferase 3. | Kynurenine aminotransferase 1. | 0.902 |
kyat3 | stk11ip | ENSSDUP00000030988 | ENSSDUP00000031100 | Kynurenine aminotransferase 3. | Serine/threonine kinase 11 interacting protein. | 0.463 |
n6amt1 | hemk1 | ENSSDUP00000007251 | ENSSDUP00000001063 | N-6 adenine-specific DNA methyltransferase 1. | HemK methyltransferase family member 1. | 0.653 |
n6amt1 | stk11ip | ENSSDUP00000007251 | ENSSDUP00000031100 | N-6 adenine-specific DNA methyltransferase 1. | Serine/threonine kinase 11 interacting protein. | 0.597 |
sppl2b | stk11ip | ENSSDUP00000016618 | ENSSDUP00000031100 | Signal peptide peptidase-like 2. | Serine/threonine kinase 11 interacting protein. | 0.535 |
stk11 | stk11ip | ENSSDUP00000022062 | ENSSDUP00000031100 | Serine/threonine kinase 11; Belongs to the protein kinase superfamily. | Serine/threonine kinase 11 interacting protein. | 0.599 |
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