STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC111220352Mucin 13b, cell surface associated. (614 aa)    
Predicted Functional Partners:
krit1
KRIT1 ankyrin repeat containing.
    
 
 0.870
ENSSDUP00000000501
Si:ch73-105b23.6.
   
 0.593
ENSSDUP00000016152
Uncharacterized protein.
   
 0.533
ENSSDUP00000017555
Uncharacterized protein.
   
 0.533
LOC111229603
Uncharacterized protein.
   
 0.533
LOC111229602
Uncharacterized protein.
   
 0.533
LOC111231897
Hexosyltransferase.
   
 
 0.503
ccm2
CCM2 scaffold protein.
   
  
 0.499
ENSSDUP00000004365
Uncharacterized protein.
   
 0.469
ENSSDUP00000023294
Uncharacterized protein.
   
 
 0.465
Your Current Organism:
Seriola dumerili
NCBI taxonomy Id: 41447
Other names: S. dumerili, greater amberjack
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.