STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC111231860Unc-51 like autophagy activating kinase 1a. (921 aa)    
Predicted Functional Partners:
rb1cc1
RB1-inducible coiled-coil 1.
    
 0.994
becn1
Beclin 1, autophagy related.
    
 0.994
mtor
Serine/threonine-protein kinase TOR; Belongs to the PI3/PI4-kinase family.
    
 0.993
atg101
Autophagy related 101.
    
 0.991
atg14
Autophagy related 14.
    
 0.991
ATG2B
Autophagy related 2B.
   
 0.981
atg2a
Autophagy related 2A.
   
 0.981
rptor
Regulatory associated protein of MTOR, complex 1.
    
 0.980
ambra1
Autophagy/beclin-1 regulator 1b.
   
 0.965
FUNDC1
FUN14 domain containing 1.
    
 0.958
Your Current Organism:
Seriola dumerili
NCBI taxonomy Id: 41447
Other names: S. dumerili, greater amberjack
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