Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
ATG2B | LOC111231860 | ENSSDUP00000003984 | ENSSDUP00000031602 | Autophagy related 2B. | Unc-51 like autophagy activating kinase 1a. | 0.981 |
ATG2B | atg101 | ENSSDUP00000003984 | ENSSDUP00000026102 | Autophagy related 2B. | Autophagy related 101. | 0.559 |
ATG2B | atg14 | ENSSDUP00000003984 | ENSSDUP00000026245 | Autophagy related 2B. | Autophagy related 14. | 0.518 |
ATG2B | atg2a | ENSSDUP00000003984 | ENSSDUP00000024303 | Autophagy related 2B. | Autophagy related 2A. | 0.910 |
ATG2B | becn1 | ENSSDUP00000003984 | ENSSDUP00000029998 | Autophagy related 2B. | Beclin 1, autophagy related. | 0.560 |
ATG2B | rb1cc1 | ENSSDUP00000003984 | ENSSDUP00000024500 | Autophagy related 2B. | RB1-inducible coiled-coil 1. | 0.610 |
FUNDC1 | LOC111231860 | ENSSDUP00000016752 | ENSSDUP00000031602 | FUN14 domain containing 1. | Unc-51 like autophagy activating kinase 1a. | 0.958 |
FUNDC1 | ambra1 | ENSSDUP00000016752 | ENSSDUP00000001285 | FUN14 domain containing 1. | Autophagy/beclin-1 regulator 1b. | 0.426 |
LOC111231860 | ATG2B | ENSSDUP00000031602 | ENSSDUP00000003984 | Unc-51 like autophagy activating kinase 1a. | Autophagy related 2B. | 0.981 |
LOC111231860 | FUNDC1 | ENSSDUP00000031602 | ENSSDUP00000016752 | Unc-51 like autophagy activating kinase 1a. | FUN14 domain containing 1. | 0.958 |
LOC111231860 | ambra1 | ENSSDUP00000031602 | ENSSDUP00000001285 | Unc-51 like autophagy activating kinase 1a. | Autophagy/beclin-1 regulator 1b. | 0.965 |
LOC111231860 | atg101 | ENSSDUP00000031602 | ENSSDUP00000026102 | Unc-51 like autophagy activating kinase 1a. | Autophagy related 101. | 0.991 |
LOC111231860 | atg14 | ENSSDUP00000031602 | ENSSDUP00000026245 | Unc-51 like autophagy activating kinase 1a. | Autophagy related 14. | 0.991 |
LOC111231860 | atg2a | ENSSDUP00000031602 | ENSSDUP00000024303 | Unc-51 like autophagy activating kinase 1a. | Autophagy related 2A. | 0.981 |
LOC111231860 | becn1 | ENSSDUP00000031602 | ENSSDUP00000029998 | Unc-51 like autophagy activating kinase 1a. | Beclin 1, autophagy related. | 0.994 |
LOC111231860 | mtor | ENSSDUP00000031602 | ENSSDUP00000002870 | Unc-51 like autophagy activating kinase 1a. | Serine/threonine-protein kinase TOR; Belongs to the PI3/PI4-kinase family. | 0.993 |
LOC111231860 | rb1cc1 | ENSSDUP00000031602 | ENSSDUP00000024500 | Unc-51 like autophagy activating kinase 1a. | RB1-inducible coiled-coil 1. | 0.994 |
LOC111231860 | rptor | ENSSDUP00000031602 | ENSSDUP00000005043 | Unc-51 like autophagy activating kinase 1a. | Regulatory associated protein of MTOR, complex 1. | 0.980 |
ambra1 | FUNDC1 | ENSSDUP00000001285 | ENSSDUP00000016752 | Autophagy/beclin-1 regulator 1b. | FUN14 domain containing 1. | 0.426 |
ambra1 | LOC111231860 | ENSSDUP00000001285 | ENSSDUP00000031602 | Autophagy/beclin-1 regulator 1b. | Unc-51 like autophagy activating kinase 1a. | 0.965 |
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