STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC111220001Nerve growth factor receptor b. (422 aa)    
Predicted Functional Partners:
LOC111218944
Nerve growth factor a (beta polypeptide); Belongs to the NGF-beta family.
    
 0.982
LOC111219495
Nerve growth factor b (beta polypeptide); Belongs to the NGF-beta family.
     
 0.960
LOC111236770
Neurotrophin receptor associated death domain.
  
  
 
0.908
ENSSDUP00000030194
NGF domain-containing protein; Belongs to the NGF-beta family.
    
 
 0.761
ntf3
Neurotrophin-3; Seems to promote the survival of visceral and proprioceptive sensory neurons; Belongs to the NGF-beta family.
    
 0.741
fgf19
Fibroblast growth factor; Belongs to the heparin-binding growth factors family.
   
 
 0.708
kitlg
Kit ligand a.
     
 0.699
Bdnf
Brain-derived neurotrophic factor; Promotes the survival of neuronal populations that are all located either in the central nervous system or directly connected to it; Belongs to the NGF-beta family.
     
 0.670
LOC111216519
Platelet-derived growth factor beta polypeptide a; Belongs to the PDGF/VEGF growth factor family.
   
 
  0.655
fgf22
Fibroblast growth factor; Belongs to the heparin-binding growth factors family.
   
 
 0.654
Your Current Organism:
Seriola dumerili
NCBI taxonomy Id: 41447
Other names: S. dumerili, greater amberjack
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.