STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSSDUP00000031741Uncharacterized protein. (606 aa)    
Predicted Functional Partners:
ENSSDUP00000031676
NIDO domain-containing protein.
 
  
 0.900
ENSSDUP00000031749
NIDO domain-containing protein.
 
  
 0.883
fau
40S ribosomal protein S30; Belongs to the eukaryotic ribosomal protein eS30 family.
   
  0.779
ENSSDUP00000016024
VWFD domain-containing protein.
 
 
  
0.545
LOC111218510
RAN binding protein 2.
   
 
  0.514
gle1
GLE1 RNA export mediator.
    
 0.472
rps24
40S ribosomal protein S24; Belongs to the eukaryotic ribosomal protein eS24 family.
   
 
 0.441
rps28
Ribosomal protein S28.
   
   0.433
LOC111229314
Anti-silencing function 1B histone chaperone.
    
 0.431
rps15
Ribosomal protein S15; Belongs to the universal ribosomal protein uS19 family.
   
   0.431
Your Current Organism:
Seriola dumerili
NCBI taxonomy Id: 41447
Other names: S. dumerili, greater amberjack
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