STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC111236567Cytochrome P450, family 2, subfamily R, polypeptide 1; Belongs to the cytochrome P450 family. (519 aa)    
Predicted Functional Partners:
LOC111221905
Cytochrome P450, family 27, subfamily B, polypeptide 1; Belongs to the cytochrome P450 family.
  
0.945
LOC111233601
Cytochrome P450, family 24, subfamily A, polypeptide 1; Belongs to the cytochrome P450 family.
  
0.931
dhcr7
7-dehydrocholesterol reductase.
   
 0.699
aasdh
Aminoadipate-semialdehyde dehydrogenase.
  
 0.647
ndufab1
Acyl carrier protein; Carrier of the growing fatty acid chain in fatty acid biosynthesis.
  
 0.545
nadsyn1
Glutamine-dependent NAD(+) synthetase; In the C-terminal section; belongs to the NAD synthetase family.
   
  
 0.524
bard1
BRCA1 associated RING domain 1.
    
 0.516
LOC111216641
Cytochrome P450, family 3, subfamily A, polypeptide 65.
  
0.488
ENSSDUP00000021842
Uncharacterized protein.
  
 0.486
LOC111222777
2Fe-2S ferredoxin-type domain-containing protein.
  
 0.480
Your Current Organism:
Seriola dumerili
NCBI taxonomy Id: 41447
Other names: S. dumerili, greater amberjack
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.