STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
pde3bPhosphodiesterase. (1114 aa)    
Predicted Functional Partners:
LOC111238251
Non-specific serine/threonine protein kinase; Belongs to the protein kinase superfamily.
    
  0.919
akt1
V-akt murine thymoma viral oncogene homolog 1.
    
  0.919
LOC111233400
Non-specific serine/threonine protein kinase; Belongs to the protein kinase superfamily.
    
  0.919
LOC111234315
Non-specific serine/threonine protein kinase; Belongs to the protein kinase superfamily.
    
  0.919
LOC111235389
Non-specific serine/threonine protein kinase; Belongs to the protein kinase superfamily.
    
  0.919
ak3
GTP:AMP phosphotransferase AK3, mitochondrial; Involved in maintaining the homeostasis of cellular nucleotides by catalyzing the interconversion of nucleoside phosphates. Has GTP:AMP phosphotransferase and ITP:AMP phosphotransferase activities.
     
 0.905
LOC111216326
Ectonucleotide pyrophosphatase/phosphodiesterase 1.
     
 0.904
aprt
Adenine phosphoribosyltransferase.
     
  0.900
adsl
Adenylosuccinate lyase; Belongs to the lyase 1 family. Adenylosuccinate lyase subfamily.
     
  0.900
LOC111227842
Adenylate cyclase type 3; Catalyzes the formation of the signaling molecule cAMP in response to G-protein signaling.
   
 0.780
Your Current Organism:
Seriola dumerili
NCBI taxonomy Id: 41447
Other names: S. dumerili, greater amberjack
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.