Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
ENSSDUP00000032422 | FGFRL1 | ENSSDUP00000032422 | ENSSDUP00000001211 | Uncharacterized protein. | Fibroblast growth factor receptor like 1. | 0.678 |
ENSSDUP00000032422 | LOC111229131 | ENSSDUP00000032422 | ENSSDUP00000017668 | Uncharacterized protein. | TGF_BETA_2 domain-containing protein. | 0.954 |
ENSSDUP00000032422 | LOC111232634 | ENSSDUP00000032422 | ENSSDUP00000003518 | Uncharacterized protein. | Fibroblast growth factor receptor like 1a. | 0.678 |
ENSSDUP00000032422 | LOC111234275 | ENSSDUP00000032422 | ENSSDUP00000000620 | Uncharacterized protein. | Fibroblast growth factor receptor. | 0.678 |
ENSSDUP00000032422 | NRTN | ENSSDUP00000032422 | ENSSDUP00000013572 | Uncharacterized protein. | Neurturin. | 0.815 |
ENSSDUP00000032422 | PSPN | ENSSDUP00000032422 | ENSSDUP00000017932 | Uncharacterized protein. | Persephin. | 0.739 |
ENSSDUP00000032422 | fgfr2 | ENSSDUP00000032422 | ENSSDUP00000006084 | Uncharacterized protein. | Fibroblast growth factor receptor 2. | 0.678 |
ENSSDUP00000032422 | fgfr3 | ENSSDUP00000032422 | ENSSDUP00000005367 | Uncharacterized protein. | Fibroblast growth factor receptor. | 0.678 |
ENSSDUP00000032422 | gdnf | ENSSDUP00000032422 | ENSSDUP00000026401 | Uncharacterized protein. | Glial cell line-derived neurotrophic factor; Neurotrophic factor that enhances survival and morphological differentiation of dopaminergic neurons and increases their high- affinity dopamine uptake. | 0.851 |
ENSSDUP00000032422 | ret | ENSSDUP00000032422 | ENSSDUP00000025257 | Uncharacterized protein. | Proto-oncogene tyrosine-protein kinase receptor Ret; Receptor tyrosine-protein kinase involved in numerous cellular mechanisms including cell proliferation, neuronal navigation, cell migration, and cell differentiation upon binding with glial cell derived neurotrophic factor family ligands. | 0.959 |
FGFRL1 | ENSSDUP00000032422 | ENSSDUP00000001211 | ENSSDUP00000032422 | Fibroblast growth factor receptor like 1. | Uncharacterized protein. | 0.678 |
FGFRL1 | NRTN | ENSSDUP00000001211 | ENSSDUP00000013572 | Fibroblast growth factor receptor like 1. | Neurturin. | 0.536 |
FGFRL1 | gdnf | ENSSDUP00000001211 | ENSSDUP00000026401 | Fibroblast growth factor receptor like 1. | Glial cell line-derived neurotrophic factor; Neurotrophic factor that enhances survival and morphological differentiation of dopaminergic neurons and increases their high- affinity dopamine uptake. | 0.591 |
LOC111229131 | ENSSDUP00000032422 | ENSSDUP00000017668 | ENSSDUP00000032422 | TGF_BETA_2 domain-containing protein. | Uncharacterized protein. | 0.954 |
LOC111229131 | ret | ENSSDUP00000017668 | ENSSDUP00000025257 | TGF_BETA_2 domain-containing protein. | Proto-oncogene tyrosine-protein kinase receptor Ret; Receptor tyrosine-protein kinase involved in numerous cellular mechanisms including cell proliferation, neuronal navigation, cell migration, and cell differentiation upon binding with glial cell derived neurotrophic factor family ligands. | 0.860 |
LOC111232634 | ENSSDUP00000032422 | ENSSDUP00000003518 | ENSSDUP00000032422 | Fibroblast growth factor receptor like 1a. | Uncharacterized protein. | 0.678 |
LOC111232634 | NRTN | ENSSDUP00000003518 | ENSSDUP00000013572 | Fibroblast growth factor receptor like 1a. | Neurturin. | 0.536 |
LOC111232634 | gdnf | ENSSDUP00000003518 | ENSSDUP00000026401 | Fibroblast growth factor receptor like 1a. | Glial cell line-derived neurotrophic factor; Neurotrophic factor that enhances survival and morphological differentiation of dopaminergic neurons and increases their high- affinity dopamine uptake. | 0.591 |
LOC111234275 | ENSSDUP00000032422 | ENSSDUP00000000620 | ENSSDUP00000032422 | Fibroblast growth factor receptor. | Uncharacterized protein. | 0.678 |
LOC111234275 | NRTN | ENSSDUP00000000620 | ENSSDUP00000013572 | Fibroblast growth factor receptor. | Neurturin. | 0.536 |
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