STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
pld6Phospholipase D family, member 6. (220 aa)    
Predicted Functional Partners:
pisd
Phosphatidylserine decarboxylase proenzyme, mitochondrial; Catalyzes the formation of phosphatidylethanolamine (PtdEtn) from phosphatidylserine (PtdSer). Plays a central role in phospholipid metabolism and in the interorganelle trafficking of phosphatidylserine.
   
 0.781
psph
Phosphoserine phosphatase.
    
 0.717
asz1
Ankyrin repeat, SAM and basic leucine zipper domain containing 1.
   
  
 0.665
tdrd9
Tudor domain containing 9.
   
  
 0.663
parn
Poly(A)-specific ribonuclease (deadenylation nuclease).
      
 0.644
henmt1
HEN methyltransferase 1.
      
 0.641
fkbp6
Peptidylprolyl isomerase.
  
  
 0.634
rhbdd3
Rhomboid domain containing 3.
   
  
 0.611
tdrkh
Tudor and KH domain containing.
    
 
 0.611
PLD4
Phospholipase D family member 4.
     
 0.609
Your Current Organism:
Seriola dumerili
NCBI taxonomy Id: 41447
Other names: S. dumerili, greater amberjack
Server load: low (18%) [HD]