STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC111229565TEA domain-containing protein. (410 aa)    
Predicted Functional Partners:
yap1
Yes-associated protein 1.
   
 0.919
LOC111217265
Vestigial-like family member 4a.
    
 
 0.639
vgll4
Vestigial-like family member 4b.
    
 
 0.639
Vgll1
Uncharacterized protein.
    
 
 0.598
LOC111229999
Vestigial like 4 like.
    
 
 0.591
LOC111226067
Insulinoma-associated 1b.
    
 
 0.470
insm1
Insulinoma-associated 1a.
    
 
 0.470
INSM2
INSM transcriptional repressor 2.
    
 
 0.470
Plekha4
PH domain-containing protein.
    
 0.449
plekha7
Pleckstrin homology domain containing, family A member 7a.
    
 0.449
Your Current Organism:
Seriola dumerili
NCBI taxonomy Id: 41447
Other names: S. dumerili, greater amberjack
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.