STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC111239518Stromal interaction molecule 1b. (690 aa)    
Predicted Functional Partners:
orai1
ORAI calcium release-activated calcium modulator 1b.
    
 0.979
orai2
ORAI calcium release-activated calcium modulator 2.
    
 0.978
LOC111230954
ORAI calcium release-activated calcium modulator 1a.
   
 0.977
stim2
Stromal interaction molecule 2b.
     
0.905
trpc1
Transient receptor potential cation channel, subfamily C, member 1; Belongs to the transient receptor (TC 1.A.4) family.
    
 0.758
itpr3
Inositol 1,4,5-trisphosphate receptor, type 3.
    
 0.546
LOC111221798
Inositol 1,4,5-trisphosphate receptor, type 1a.
    
 0.546
LOC111221456
Inositol 1,4,5-trisphosphate receptor, type 1b.
    
 0.546
itpr2
Inositol 1,4,5-trisphosphate receptor, type 2.
    
 0.546
LOC111233323
Transient receptor potential cation channel, subfamily C, member 5a; Belongs to the transient receptor (TC 1.A.4) family.
    
 0.479
Your Current Organism:
Seriola dumerili
NCBI taxonomy Id: 41447
Other names: S. dumerili, greater amberjack
Server load: low (18%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.