STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AVPR1AArginine vasopressin receptor 1Aa. (410 aa)    
Predicted Functional Partners:
LOC111230843
Arginine vasopressin; Belongs to the vasopressin/oxytocin family.
   
 0.966
LOC111232198
Guanine nucleotide binding protein (G protein), alpha 11a (Gq class).
    
 0.927
LOC111230911
Uncharacterized protein.
    
 0.927
LOC111239870
Uncharacterized protein.
    
  0.916
LOC111239871
Guanine nucleotide binding protein (G protein), alpha 14.
    
 0.916
LOC111219813
Uncharacterized protein.
    
  0.914
gna12
G protein subunit alpha 12.
    
  0.914
LOC111236257
Guanine nucleotide binding protein (G protein), alpha 13b.
    
  0.914
LOC111230848
Oxytocin; Belongs to the vasopressin/oxytocin family.
   
 0.782
LOC111230822
Guanine nucleotide binding protein (G protein), alpha 14a.
    
 0.746
Your Current Organism:
Seriola dumerili
NCBI taxonomy Id: 41447
Other names: S. dumerili, greater amberjack
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