LOC111229544 protein (Seriola dumerili) - STRING interaction network

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Predicted Interactions

gene neighborhood

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textmining

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Score

LOC111229544

Sorting nexin 1a. (794 aa)

Predicted Functional Partners:

gak

0.947

SNX2

0.928

vps35

0.927

vps29

0.923

snx1

0.901

snx6

0.873

snx5

0.873

vps26a

0.724

LOC111221943

0.710

vps26b

0.675

Your Current Organism:

Seriola dumerili

NCBI taxonomy Id: 41447
Other names: S. dumerili, greater amberjack

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
LOC111221943	LOC111229544	ENSSDUP00000008296	ENSSDUP00000032682	Si:dkey-28n18.9.	Sorting nexin 1a.	0.710
LOC111221943	SNX2	ENSSDUP00000008296	ENSSDUP00000022940	Si:dkey-28n18.9.	Sorting nexin 2.	0.710
LOC111221943	snx1	ENSSDUP00000008296	ENSSDUP00000000781	Si:dkey-28n18.9.	Sorting nexin 1b.	0.710
LOC111221943	vps29	ENSSDUP00000008296	ENSSDUP00000006022	Si:dkey-28n18.9.	Vacuolar protein sorting-associated protein 29; Acts as component of the retromer cargo-selective complex (CSC). The CSC is believed to be the core functional component of retromer or respective retromer complex variants acting to prevent missorting of selected transmembrane cargo proteins into the lysosomal degradation pathway.	0.508
LOC111221943	vps35	ENSSDUP00000008296	ENSSDUP00000015771	Si:dkey-28n18.9.	Vacuolar protein sorting-associated protein 35; Plays a role in vesicular protein sorting.	0.522
LOC111229544	LOC111221943	ENSSDUP00000032682	ENSSDUP00000008296	Sorting nexin 1a.	Si:dkey-28n18.9.	0.710
LOC111229544	SNX2	ENSSDUP00000032682	ENSSDUP00000022940	Sorting nexin 1a.	Sorting nexin 2.	0.928
LOC111229544	gak	ENSSDUP00000032682	ENSSDUP00000031183	Sorting nexin 1a.	Cyclin G associated kinase.	0.947
LOC111229544	snx1	ENSSDUP00000032682	ENSSDUP00000000781	Sorting nexin 1a.	Sorting nexin 1b.	0.901
LOC111229544	snx5	ENSSDUP00000032682	ENSSDUP00000002298	Sorting nexin 1a.	Sorting nexin; Involved in several stages of intracellular trafficking.	0.873
LOC111229544	snx6	ENSSDUP00000032682	ENSSDUP00000000592	Sorting nexin 1a.	Sorting nexin; Involved in several stages of intracellular trafficking.	0.873
LOC111229544	vps26a	ENSSDUP00000032682	ENSSDUP00000029940	Sorting nexin 1a.	VPS26, retromer complex component A.	0.724
LOC111229544	vps26b	ENSSDUP00000032682	ENSSDUP00000005957	Sorting nexin 1a.	VPS26, retromer complex component B.	0.675
LOC111229544	vps29	ENSSDUP00000032682	ENSSDUP00000006022	Sorting nexin 1a.	Vacuolar protein sorting-associated protein 29; Acts as component of the retromer cargo-selective complex (CSC). The CSC is believed to be the core functional component of retromer or respective retromer complex variants acting to prevent missorting of selected transmembrane cargo proteins into the lysosomal degradation pathway.	0.923
LOC111229544	vps35	ENSSDUP00000032682	ENSSDUP00000015771	Sorting nexin 1a.	Vacuolar protein sorting-associated protein 35; Plays a role in vesicular protein sorting.	0.927
SNX2	LOC111221943	ENSSDUP00000022940	ENSSDUP00000008296	Sorting nexin 2.	Si:dkey-28n18.9.	0.710
SNX2	LOC111229544	ENSSDUP00000022940	ENSSDUP00000032682	Sorting nexin 2.	Sorting nexin 1a.	0.928
SNX2	gak	ENSSDUP00000022940	ENSSDUP00000031183	Sorting nexin 2.	Cyclin G associated kinase.	0.947
SNX2	snx1	ENSSDUP00000022940	ENSSDUP00000000781	Sorting nexin 2.	Sorting nexin 1b.	0.928
SNX2	snx5	ENSSDUP00000022940	ENSSDUP00000002298	Sorting nexin 2.	Sorting nexin; Involved in several stages of intracellular trafficking.	0.932