STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSSDUP00000032914Reelin domain-containing protein. (339 aa)    
Predicted Functional Partners:
LOC111228634
Mitochondrial ribosomal protein L23.
   
 
 0.861
mrpl46
Mitochondrial ribosomal protein L46.
   
   0.835
mrpl3
Mitochondrial ribosomal protein L3; Belongs to the universal ribosomal protein uL3 family.
   
   0.828
mrpl27
Mitochondrial ribosomal protein L27.
   
 
 0.818
mrpl47
Mitochondrial ribosomal protein L47.
   
 
 0.816
mrpl19
Mitochondrial ribosomal protein L19.
   
 
 0.812
mrpl16
Mitochondrial ribosomal protein L16.
   
 
 0.811
mrpl22
Mitochondrial ribosomal protein L22; Belongs to the universal ribosomal protein uL22 family.
   
 
 0.810
mrpl13
Mitochondrial ribosomal protein L13; Belongs to the universal ribosomal protein uL13 family.
   
 
 0.803
mrpl41
Mitochondrial ribosomal protein L41.
   
 
 0.801
Your Current Organism:
Seriola dumerili
NCBI taxonomy Id: 41447
Other names: S. dumerili, greater amberjack
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