Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
ENSSDUP00000028334 | ENSSDUP00000033100 | ENSSDUP00000028334 | ENSSDUP00000033100 | Uncharacterized protein. | BHLH domain-containing protein. | 0.653 |
ENSSDUP00000028334 | LOC111228963 | ENSSDUP00000028334 | ENSSDUP00000021591 | Uncharacterized protein. | Transcription factor 3a. | 0.434 |
ENSSDUP00000028334 | LOC111229281 | ENSSDUP00000028334 | ENSSDUP00000001561 | Uncharacterized protein. | LIM-domain binding 1b. | 0.599 |
ENSSDUP00000028334 | LOC111232104 | ENSSDUP00000028334 | ENSSDUP00000007209 | Uncharacterized protein. | Transcription factor 3b. | 0.434 |
ENSSDUP00000028334 | LOC111232721 | ENSSDUP00000028334 | ENSSDUP00000011474 | Uncharacterized protein. | LIM domain binding 2a. | 0.589 |
ENSSDUP00000028334 | LOC111234467 | ENSSDUP00000028334 | ENSSDUP00000031710 | Uncharacterized protein. | LIM domain binding 1a. | 0.599 |
ENSSDUP00000028334 | TCF4 | ENSSDUP00000028334 | ENSSDUP00000002113 | Uncharacterized protein. | Transcription factor 4. | 0.434 |
ENSSDUP00000028334 | lmo2 | ENSSDUP00000028334 | ENSSDUP00000030499 | Uncharacterized protein. | LIM domain only 2 (rhombotin-like 1). | 0.935 |
ENSSDUP00000028334 | tcf12 | ENSSDUP00000028334 | ENSSDUP00000025437 | Uncharacterized protein. | Transcription factor 12. | 0.434 |
ENSSDUP00000033100 | ENSSDUP00000028334 | ENSSDUP00000033100 | ENSSDUP00000028334 | BHLH domain-containing protein. | Uncharacterized protein. | 0.653 |
ENSSDUP00000033100 | LOC111221541 | ENSSDUP00000033100 | ENSSDUP00000027282 | BHLH domain-containing protein. | GATA binding protein 1a. | 0.653 |
ENSSDUP00000033100 | LOC111228963 | ENSSDUP00000033100 | ENSSDUP00000021591 | BHLH domain-containing protein. | Transcription factor 3a. | 0.654 |
ENSSDUP00000033100 | LOC111229281 | ENSSDUP00000033100 | ENSSDUP00000001561 | BHLH domain-containing protein. | LIM-domain binding 1b. | 0.718 |
ENSSDUP00000033100 | LOC111232104 | ENSSDUP00000033100 | ENSSDUP00000007209 | BHLH domain-containing protein. | Transcription factor 3b. | 0.653 |
ENSSDUP00000033100 | LOC111232721 | ENSSDUP00000033100 | ENSSDUP00000011474 | BHLH domain-containing protein. | LIM domain binding 2a. | 0.691 |
ENSSDUP00000033100 | LOC111234467 | ENSSDUP00000033100 | ENSSDUP00000031710 | BHLH domain-containing protein. | LIM domain binding 1a. | 0.718 |
ENSSDUP00000033100 | TCF4 | ENSSDUP00000033100 | ENSSDUP00000002113 | BHLH domain-containing protein. | Transcription factor 4. | 0.654 |
ENSSDUP00000033100 | lmo2 | ENSSDUP00000033100 | ENSSDUP00000030499 | BHLH domain-containing protein. | LIM domain only 2 (rhombotin-like 1). | 0.902 |
ENSSDUP00000033100 | tcf12 | ENSSDUP00000033100 | ENSSDUP00000025437 | BHLH domain-containing protein. | Transcription factor 12. | 0.654 |
LOC111221541 | ENSSDUP00000033100 | ENSSDUP00000027282 | ENSSDUP00000033100 | GATA binding protein 1a. | BHLH domain-containing protein. | 0.653 |
page 1 of 5