Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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Neighborhood
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Co-occurrence
Co-expression
Experiments
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[Homology]
Score
RC1_0146Conserved hypothetical protein; Belongs to the UPF0145 family. (107 aa)    
Predicted Functional Partners:
RC1_2672
Conserved domain protein; Identified by match to protein family HMM PF00805; Belongs to the UPF0145 family.
  
     0.774
RC1_0147
Fumarylacetoacetate (FAA) hydrolase, putative; Identified by match to protein family HMM PF00441 match to protein family HMM PF02770 match to protein family HMM PF02771 match to protein family HMM PF08028.
       0.693
RC1_0145
Transcriptional regulator, MarR family protein; Identified by match to protein family HMM PF00376.
       0.586
flgH
Flagellar L-ring protein FlgH; Assembles around the rod to form the L-ring and probably protects the motor/basal body from shearing forces during rotation.
   
    0.548
flgH-2
Flagellar L-ring protein FlgH; Assembles around the rod to form the L-ring and probably protects the motor/basal body from shearing forces during rotation.
   
    0.548
RC1_2671
Conserved hypothetical protein; Identified by match to protein family HMM PF00107.
 
     0.471
sufC
FeS assembly ATPase SufC.
  
  
 0.411
Your Current Organism:
Rhodospirillum centenum
NCBI taxonomy Id: 414684
Other names: R. centenum SW, Rhodocista centenaria SW, Rhodospirillum centenum SW, Rhodospirillum centenum str. SW, Rhodospirillum centenum strain SW
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