STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
glpQGlycerophosphoryl diester phosphodiesterase; Identified by match to protein family HMM TIGR01840. (377 aa)    
Predicted Functional Partners:
RC1_2887
Glycerophosphoryl diester phosphodiesterase, putative; Identified by match to protein family HMM PF06108.
  
  
0.922
ugpQ
[Synonyms] Glycerophosphodiester phosphodiesterase identified by match to protein family HMM PF00312 match to protein family HMM TIGR00952.
     
 0.918
pldB
Lysophospholipase L2; Glycosyl transferase, family 51, pseudogene;identified by match to protein family HMM PF00762 match to protein family HMM TIGR00109.
    
 0.915
RC1_2883
Conserved hypothetical protein; Identified by match to protein family HMM PF00012 match to protein family HMM TIGR02350.
    
 0.868
glpK
Glycerol kinase; Key enzyme in the regulation of glycerol uptake and metabolism. Catalyzes the phosphorylation of glycerol to yield sn- glycerol 3-phosphate; Belongs to the FGGY kinase family.
  
  
 0.866
glpD
Glycerol-3-phosphate dehydrogenase; Identified by match to protein family HMM PF00588.
  
 0.815
phy
3-phytase; [Synonyms] Phytate 3-phosphatase Myo-inositol-hexaphosphate 3-phosphohydrolase identified by match to protein family HMM PF00593 match to protein family HMM PF07715.
 
     0.733
phoD
Alkaline phosphatase D; Identified by match to protein family HMM PF04230.
 
  
 0.596
phoD-2
Alkaline phosphatase D; Identified by match to protein family HMM PF02654 match to protein family HMM TIGR00317.
 
  
 0.574
RC1_0247
Conserved hypothetical protein.
 
  
 0.537
Your Current Organism:
Rhodospirillum centenum
NCBI taxonomy Id: 414684
Other names: R. centenum SW, Rhodocista centenaria SW, Rhodospirillum centenum SW, Rhodospirillum centenum str. SW, Rhodospirillum centenum strain SW
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.