STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
rsbRsigma-B modulator protein; Identified by match to protein family HMM PF02518. (275 aa)    
Predicted Functional Partners:
rsbS
Antagonist protein RsbS; serine;Alternate names identified by match to protein family HMM PF01584.
 
 
  
0.976
RC1_2159
Histidine-containing phosphotransfer (HPt) domain protein.
  
  
 0.879
RC1_3033
Sensor protein torS, putative.
  
  
 0.879
RC1_1779
Response regulator receiver domain protein; Identified by match to protein family HMM PF04055 match to protein family HMM PF06463 match to protein family HMM TIGR02666.
  
  
 0.869
RC1_0924
ABC transporter substrate binding protein, putative; Identified by match to protein family HMM PF01292.
  
   0.848
RC1_1441
Conserved hypothetical protein.
  
   0.848
bfr
Bacterioferritin; Iron-storage protein.
   
  
 0.847
metN
D-methionine transport ATP-binding protein MetN; Gene symbol synonym.
   
   0.844
RC1_1443
ABC transporter, permease protein, putative; GB identified by match to protein family HMM PF01209.
   
   0.844
RC1_1579
ABC transporter permease protein, putative; Identified by match to protein family HMM PF00398 match to protein family HMM TIGR00755.
   
   0.844
Your Current Organism:
Rhodospirillum centenum
NCBI taxonomy Id: 414684
Other names: R. centenum SW, Rhodocista centenaria SW, Rhodospirillum centenum SW, Rhodospirillum centenum str. SW, Rhodospirillum centenum strain SW
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.