Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
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empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
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Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
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from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
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gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
cheZProbable chemotaxis phosphatase, CheZ; Identified by Glimmer2 putative. (123 aa)    
Predicted Functional Partners:
cheY
Chemotaxis protein CheY, putative; Also called response regulator receiver; identified by match to protein family HMM PF00072.
     
 0.928
RC1_0354
Methyl-accepting chemotaxis sensory transducer, putative; Identified by match to protein family HMM PF00512 match to protein family HMM PF00989 match to protein family HMM PF02518 match to protein family HMM TIGR00229.
     
 0.928
fixJ
Transcriptional regulatory protein FixJ; Contains PF00072.
     
 0.869
cheZ-2
Chemotaxis phosphatase protein CheZ, putative.
      
 0.700
cheZ-3
Chemotaxis protein CheZ, putative.
      
 0.700
cheY-2
Chemotaxis protein CheY; Also called response regulator receiver; identified by match to protein family HMM PF00515 match to protein family HMM PF07719.
      
 0.700
RC1_3878
Chemotaxis protein methyltransferase, putative; Name variations include MCP methyltransferase.
      
 0.700
cheB
Protein-glutamate methylesterase CheB; Involved in chemotaxis. Part of a chemotaxis signal transduction system that modulates chemotaxis in response to various stimuli. Catalyzes the demethylation of specific methylglutamate residues introduced into the chemoreceptors (methyl-accepting chemotaxis proteins or MCP) by CheR. Also mediates the irreversible deamidation of specific glutamine residues to glutamic acid. Belongs to the CheB family.
      
 0.625
cheB2
Chemotaxis response regulator protein-glutamate methylesterase CheB; Involved in chemotaxis. Part of a chemotaxis signal transduction system that modulates chemotaxis in response to various stimuli. Catalyzes the demethylation of specific methylglutamate residues introduced into the chemoreceptors (methyl-accepting chemotaxis proteins or MCP) by CheR. Also mediates the irreversible deamidation of specific glutamine residues to glutamic acid. Belongs to the CheB family.
      
 0.519
cheB3
Protein-glutamate methylesterase CheB; Involved in chemotaxis. Part of a chemotaxis signal transduction system that modulates chemotaxis in response to various stimuli. Catalyzes the demethylation of specific methylglutamate residues introduced into the chemoreceptors (methyl-accepting chemotaxis proteins or MCP) by CheR. Also mediates the irreversible deamidation of specific glutamine residues to glutamic acid. Belongs to the CheB family.
      
 0.518
Your Current Organism:
Rhodospirillum centenum
NCBI taxonomy Id: 414684
Other names: R. centenum SW, Rhodocista centenaria SW, Rhodospirillum centenum SW, Rhodospirillum centenum str. SW, Rhodospirillum centenum strain SW
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