STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
RC1_0511Conserved hypothetical protein. (242 aa)    
Predicted Functional Partners:
mutY
A/G-specific adenine glycosylase; Adenine glycosylase active on G-A mispairs.
  
    0.776
RC1_1068
Molybdopterin binding protein, putative; Next to the CO dehydrogenase accessory factor, possibly involved in the attachment of molybdenum to CO dehydrogenase; identified by match to protein family HMM PF06206.
  
     0.642
RC1_1674
Conserved hypothetical protein.
  
     0.614
RC1_4100
Conserved hypothetical protein; Identified by match to protein family HMM PF00702 match to protein family HMM TIGR01509.
  
     0.577
RC1_0509
Conserved hypothetical protein; Identified by match to protein family HMM PF00582.
       0.572
RC1_0840
Conserved hypothetical protein; Identified by match to protein family HMM PF01047 match to protein family HMM PF03551.
  
     0.513
azlC
AzlC family protein.
  
     0.486
RC1_1222
Putative transmembrane protein.
  
     0.479
RC1_3662
Conserved hypothetical protein; [contains] Alpha-2-macroglobulin family N-terminal region identified by match to protein family HMM PF01040 match to protein family HMM TIGR01473.
 
     0.472
RC1_2351
Conserved hypothetical protein; Identified by match to protein family HMM PF01047.
  
     0.451
Your Current Organism:
Rhodospirillum centenum
NCBI taxonomy Id: 414684
Other names: R. centenum SW, Rhodocista centenaria SW, Rhodospirillum centenum SW, Rhodospirillum centenum str. SW, Rhodospirillum centenum strain SW
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.