Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
RC1_0779Threonine dehydratase, putative; Synonym identified by match to protein family HMM PF00483. (331 aa)    
Predicted Functional Partners:
ilvH
Acetolactate synthase, small subunit; Identified by match to protein family HMM PF01433 match to protein family HMM TIGR02414.
  
 0.962
thrC
Threonine synthase; Identified by match to protein family HMM PF03279.
  
 
 0.960
leuB
3-isopropylmalate dehydrogenase; Catalyzes the oxidation of 3-carboxy-2-hydroxy-4- methylpentanoate (3-isopropylmalate) to 3-carboxy-4-methyl-2- oxopentanoate. The product decarboxylates to 4-methyl-2 oxopentanoate.
 
 0.954
ilvB
Acetolactate synthase large subunit, putative; Identified by match to protein family HMM PF01553; Belongs to the TPP enzyme family.
 
 0.950
ilvI
Acetolactate synthase, large subunit, biosynthetic type; Identified by match to protein family HMM PF01661.
 
 0.950
ilvG
Acetolactate synthase isozyme II large subunit, putative; Identified by match to protein family HMM PF00378; Belongs to the TPP enzyme family.
  
 0.942
RC1_1775
Thiamine pyrophosphate enzyme, putative; Identified by match to protein family HMM PF00072 match to protein family HMM PF01584 match to protein family HMM PF01627 match to protein family HMM PF02518 match to protein family HMM PF02895.
  
 0.942
trpB
Tryptophan synthase, beta subunit; The beta subunit is responsible for the synthesis of L- tryptophan from indole and L-serine.
  
 0.942
glyA
Serine hydroxymethyltransferase; Catalyzes the reversible interconversion of serine and glycine with tetrahydrofolate (THF) serving as the one-carbon carrier. This reaction serves as the major source of one-carbon groups required for the biosynthesis of purines, thymidylate, methionine, and other important biomolecules. Also exhibits THF-independent aldolase activity toward beta-hydroxyamino acids, producing glycine and aldehydes, via a retro-aldol mechanism.
     
 0.926
ilvE-2
Branched-chain-amino-acid aminotransferase, putative; Acts on leucine, isoleucine and valine. Belongs to the class-IV pyridoxal-phosphate-dependent aminotransferase family.
  
 0.925
Your Current Organism:
Rhodospirillum centenum
NCBI taxonomy Id: 414684
Other names: R. centenum SW, Rhodocista centenaria SW, Rhodospirillum centenum SW, Rhodospirillum centenum str. SW, Rhodospirillum centenum strain SW
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