Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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Neighborhood
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Co-occurrence
Co-expression
Experiments
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[Homology]
Score
msrAPeptide methionine-S-sulfoxide reductase MsrA, putative; Has an important function as a repair enzyme for proteins that have been inactivated by oxidation. Catalyzes the reversible oxidation-reduction of methionine sulfoxide in proteins to methionine. (219 aa)    
Predicted Functional Partners:
ccmG
Part of the cytochrome c-type biogenesis protein cluster[synonym] thiol:disulfide interchange protein CycY identified by match to protein family HMM PF01022.
   
 0.917
grxC
Glutaredoxin 3; Has a glutathione-disulfide oxidoreductase activity in the presence of NADPH and glutathione reductase. Reduces low molecular weight disulfides and proteins.
  
 
 0.845
dsbD
Thiol:disulfide interchange protein DsbD, putative; Has no HMMs but some homologs With the identification of thiolSome other homologs are identified as: C-type cytochrome biogenesis protein i.g; GB:AAY47612.1.
   
 
 0.834
RC1_2526
Conserved hypothetical protein; Identified by match to protein family HMM PF01914 match to protein family HMM TIGR00427.
    
 0.722
RC1_1379
Glutathione peroxidase, putative; Identified by match to protein family HMM PF04168; Belongs to the glutathione peroxidase family.
  
 
 0.685
gpo
Glutathione peroxidase, putative; Identified by match to protein family HMM PF01073 match to protein family HMM PF01370 match to protein family HMM PF01408 match to protein family HMM PF04321 match to protein family HMM PF07993; Belongs to the glutathione peroxidase family.
  
 
 0.685
cysNC
Bifunctional enzyme cysN; Catalyzes the synthesis of activated sulfate. Belongs to the TRAFAC class translation factor GTPase superfamily. Classic translation factor GTPase family. CysN/NodQ subfamily.
   
  
 0.575
flgK
Flagellar hook-associated protein 1 FlgK, putative; Part of the hook-filament junction; HAP1 first hook-filament junction protein cell exterior.
    
   0.570
flgK-2
Flagellar hook-associated protein FlgK, putative; HAP1 first hook-filament junction protein cell exterior.
    
   0.570
RC1_0810
Hypothetical protein; Identified by Glimmer2 putative.
       0.542
Your Current Organism:
Rhodospirillum centenum
NCBI taxonomy Id: 414684
Other names: R. centenum SW, Rhodocista centenaria SW, Rhodospirillum centenum SW, Rhodospirillum centenum str. SW, Rhodospirillum centenum strain SW
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