Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
RC1_0944TPR domain protein; Identified by match to protein family HMM PF00155. (593 aa)    
Predicted Functional Partners:
RC1_0942
Hemolysin activation; Identified by match to protein family HMM PF01323.
 
   
 0.927
RC1_0943
The GLUG motif domain protein, putative; Identified by match to protein family HMM PF01435 match to protein family HMM PF07719.
 
   
 0.877
nuoM
[Synonyms] NADH dehydrogenase I, chain M identified by match to protein family HMM PF02687 match to protein family HMM TIGR02212.
    
 
 0.876
RC1_1385
Peptidyl-prolyl cis-trans isomerase family protein, putative; PPIases accelerate the folding of proteins. It catalyzes the cis-trans isomerization of proline imidic peptide bonds in oligopeptides; Belongs to the cyclophilin-type PPIase family.
   
 
 0.834
RC1_1386
Peptidyl-prolyl cis-trans isomerase family protein, putative; PPIases accelerate the folding of proteins. It catalyzes the cis-trans isomerization of proline imidic peptide bonds in oligopeptides; Belongs to the cyclophilin-type PPIase family.
   
 
 0.834
RC1_2265
Peptidyl-prolyl cis-trans isomerase family protein, putative; No HMMs but in the close position to closely related proteins from the same family.All homologs are uncharacterized.
   
 
 0.834
RC1_2437
Hypothetical protein; Identified by Glimmer2 putative.
  
 
 0.783
htpG
Molecular chaperone,hSP90 family, putative; Molecular chaperone. Has ATPase activity.
  
 0.778
RC1_1414
Probable ATPase; [contains]tetratricopeptide repeat identified by Glimmer2 putative.
  
 0.766
RC1_1017
Conserved hypothetical protein.
  
 
 0.754
Your Current Organism:
Rhodospirillum centenum
NCBI taxonomy Id: 414684
Other names: R. centenum SW, Rhodocista centenaria SW, Rhodospirillum centenum SW, Rhodospirillum centenum str. SW, Rhodospirillum centenum strain SW
Server load: medium (48%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.