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STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
dgtDeoxyguanosinetriphosphate triphosphohydrolase, putative. (440 aa)    
Predicted Functional Partners:
surE-2
5'/3'-nucleotidase SurE; Nucleotidase that shows phosphatase activity on nucleoside 5'-monophosphates; Belongs to the SurE nucleotidase family.
    
 0.923
surE
5'/3'-nucleotidase SurE; Nucleotidase that shows phosphatase activity on nucleoside 5'-monophosphates; Belongs to the SurE nucleotidase family.
    
 0.910
ndk
Nucleoside diphosphate kinase; Major role in the synthesis of nucleoside triphosphates other than ATP. The ATP gamma phosphate is transferred to the NDP beta phosphate via a ping-pong mechanism, using a phosphorylated active-site intermediate; Belongs to the NDK family.
   
 
  0.902
nrdD
Anaerobic ribonucleoside-triphosphate reductase; Pseudogene;identified by match to protein family HMM PF00005.
    
  0.900
pyk
Pyruvate kinase; Identified by match to protein family HMM PF00148 match to protein family HMM TIGR01279; Belongs to the pyruvate kinase family.
     
  0.900
RC1_2401
Pyruvate kinase; Belongs to the pyruvate kinase family.
     
  0.900
RC1_1023
Iron-sulfur cluster assembly accessory protein; Identified by match to protein family HMM PF02355 match to protein family HMM PF07549 match to protein family HMM TIGR00916 match to protein family HMM TIGR00966 match to protein family HMM TIGR01129; Belongs to the HesB/IscA family.
     
 0.724
argS
TIGR00456 PF00750: arginyl-tRNA synthetase With a good score above the trusted cutoff and characterized homologs; identified by match to protein family HMM PF00376.
  
  
 0.685
tonB-4
Protein TonB, putative; Identified by match to protein family HMM PF00278 match to protein family HMM PF02784.
  
  
 0.636
RC1_1027
Beta-glucosidase-like protein.
       0.635
Your Current Organism:
Rhodospirillum centenum
NCBI taxonomy Id: 414684
Other names: R. centenum SW, Rhodocista centenaria SW, Rhodospirillum centenum SW, Rhodospirillum centenum str. SW, Rhodospirillum centenum strain SW
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