STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
RC1_1078Membrane protein, putative; Part of the CO oxidising (Cox) system operon; identified by match to protein family HMM PF00994 match to protein family HMM PF01128. (497 aa)    
Predicted Functional Partners:
arsC
Probable arsenate reductase ArsC, putative; Identified by match to protein family HMM PF01734; similar to protein tyrosine phosphatase, putative; Belongs to the low molecular weight phosphotyrosine protein phosphatase family.
  
  
 0.577
guaA
GMP synthase (glutamine-hydrolyzing); Catalyzes the synthesis of GMP from XMP.
  
    0.562
coxG
Carbon monoxide dehydrogenase subunit G; Part of the CO oxidising (Cox) system operon; identified by match to protein family HMM PF00005 match to protein family HMM PF00664.
       0.560
RC1_1079
Conserved hypothetical protein.
       0.546
RC1_2051
ArsR domain proteni.
  
  
 0.487
kefB
Glutathione-regulated potassium-efflux system protein KefB; Gene symbol synonym Alternate names: K(+); Belongs to the monovalent cation:proton antiporter 2 (CPA2) transporter (TC 2.A.37) family.
     
 0.485
polA
DNA polymerase I, putative; In addition to polymerase activity, this DNA polymerase exhibits 5'-3' exonuclease activity; Belongs to the DNA polymerase type-A family.
  
    0.474
rpsF
Ribosomal protein S6; Binds together with S18 to 16S ribosomal RNA.
   
    0.461
cysNC
Bifunctional enzyme cysN; Catalyzes the synthesis of activated sulfate. Belongs to the TRAFAC class translation factor GTPase superfamily. Classic translation factor GTPase family. CysN/NodQ subfamily.
     
 0.459
Your Current Organism:
Rhodospirillum centenum
NCBI taxonomy Id: 414684
Other names: R. centenum SW, Rhodocista centenaria SW, Rhodospirillum centenum SW, Rhodospirillum centenum str. SW, Rhodospirillum centenum strain SW
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.