STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ccoQCytochrome c oxidase, identified by match to protein family HMM PF01336. (57 aa)    
Predicted Functional Partners:
ccoP
Cytochrome c oxidase, Cbb3-type, subunit III; C-type cytochrome. Part of the cbb3-type cytochrome c oxidase complex.
  
 0.999
ccoO
Cytochrome c oxidase, cbb3-type, subunit II; Identified by match to protein family HMM PF00270 match to protein family HMM PF00271.
  
 
 0.998
ccoN
Cytochrome c oxidase, cbb3-type, subunit I; Identified by match to protein family HMM PF04367; Belongs to the heme-copper respiratory oxidase family.
  
 
 0.998
fixG
Nitrogen fixation protein fixG; Identified by match to protein family HMM PF03937.
  
  
 0.951
coxC
Cytochrome c oxidase polypeptide III identified by match to protein family HMM PF01212.
     
 0.910
coxB
Cytochrome c oxidase subunit II (Heme/copper-type cytochrome/quinol oxidase); Subunits I and II form the functional core of the enzyme complex. Electrons originating in cytochrome c are transferred via heme a and Cu(A) to the binuclear center formed by heme a3 and Cu(B).
     
 0.901
ctaC
Cytochrome c oxidase, subunit II (Heme/copper-type cytochrome/quinol oxidases); Subunits I and II form the functional core of the enzyme complex. Electrons originating in cytochrome c are transferred via heme a and Cu(A) to the binuclear center formed by heme a3 and Cu(B).
     
 0.901
ctaB
Protoheme IX farnesyltransferase; Converts heme B (protoheme IX) to heme O by substitution of the vinyl group on carbon 2 of heme B porphyrin ring with a hydroxyethyl farnesyl side group.
     
 0.901
coxA
Cytochrome c oxidase, subunit I (Heme/copper-type cytochrome/quinol oxidase); Cytochrome c oxidase is the component of the respiratory chain that catalyzes the reduction of oxygen to water. Subunits 1-3 form the functional core of the enzyme complex. CO I is the catalytic subunit of the enzyme. Electrons originating in cytochrome c are transferred via the copper A center of subunit 2 and heme A of subunit 1 to the bimetallic center formed by heme A3 and copper B.
     
  0.900
ctaD
Cytochrome c oxidase, subunit I (Heme/copper-type cytochrome/quinol oxidases); Cytochrome c oxidase is the component of the respiratory chain that catalyzes the reduction of oxygen to water. Subunits 1-3 form the functional core of the enzyme complex. CO I is the catalytic subunit of the enzyme. Electrons originating in cytochrome c are transferred via the copper A center of subunit 2 and heme A of subunit 1 to the bimetallic center formed by heme A3 and copper B.
     
  0.900
Your Current Organism:
Rhodospirillum centenum
NCBI taxonomy Id: 414684
Other names: R. centenum SW, Rhodocista centenaria SW, Rhodospirillum centenum SW, Rhodospirillum centenum str. SW, Rhodospirillum centenum strain SW
Server load: medium (72%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.