STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
hyfFHydrogenase-4 membrane subunit F; Identified by match to protein family HMM PF01926 match to protein family HMM TIGR00231 match to protein family HMM TIGR00650. (481 aa)    
Predicted Functional Partners:
hyfG
Hydrogenase-4 component G.
 
 
 0.999
mrpA
Na(+)/H(+) antiporter subunit A; [Synonyms] Multiple resistance and pH homeostasis protein A Mrp complex subunit A identified by match to protein family HMM PF04442.
 
 
0.999
hyfI
Hydrogenase 4 Fe-S subunit identified by match to protein family HMM PF06627.
 
 
 0.996
hyfC
Hydrogenase-4 component C, membrane subunit.
 
 
 0.994
mrpC
Na(+)/H(+) antiporter subunit C; [synonoyms] Multiple resistance and pH homeostasis protein C Mrp complex subunit C identified by match to protein family HMM PF06170.
  
 
 0.976
mrpE
Na(+)/H(+) antiporter subunit E; [Synonyms] Multiple resistance and pH homeostasis protein E Mrp complex subunit E.
  
 
 0.976
mrpF
Na(+)/H(+) antiporter subunit F; [Synonyms] Multiple resistance and pH homeostasis protein F Mrp complex subunit F Sodium-cholate efflux protein mr PF.
  
 
 0.976
mrpG
Na(+)/H(+) antiporter subunit G; [Synonyms] Multiple resistance and pH homeostasis protein G Mrp complex subunit G.
  
 
 0.973
hyfE
Hydrogenase-4 membrane subunit E.
 
  
 0.970
hyfB
Hydrogenase-4 component B, membrane subunit.
 
  
0.968
Your Current Organism:
Rhodospirillum centenum
NCBI taxonomy Id: 414684
Other names: R. centenum SW, Rhodocista centenaria SW, Rhodospirillum centenum SW, Rhodospirillum centenum str. SW, Rhodospirillum centenum strain SW
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.