STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
puuA[synonyms] Gamma-Glu-Put synthetase Glutamate--putrescine ligase identified by match to protein family HMM PF02633. (456 aa)    
Predicted Functional Partners:
gltB
Glutamate synthase, large subunit.
  
 
 0.987
RC1_1468
FAD dependent oxidoreductase, putative; Identified by match to protein family HMM PF00171.
 
 
 0.959
RC1_1465
Glutamine synthetase, putative; Identified by match to protein family HMM PF00106 match to protein family HMM PF07993; Belongs to the glutamine synthetase family.
 
  
 
0.951
nifK
Nitrogenase molybdenum-iron protein beta chain; This molybdenum-iron protein is part of the nitrogenase complex that catalyzes the key enzymatic reactions in nitrogen fixation; Belongs to the NifD/NifK/NifE/NifN family.
   
 
 0.948
putA
Proline dehydrogenase; Oxidizes proline to glutamate for use as a carbon and nitrogen source; In the C-terminal section; belongs to the aldehyde dehydrogenase family.
   
 
 0.936
glmS
Glucosamine--fructose-6-phosphate aminotransferase [isomerizing], putative.
  
 
 0.932
gltD
Glutamate synthase, small subunit; Identified by match to protein family HMM PF00291 match to protein family HMM PF01842 match to protein family HMM TIGR01127.
  
 
 0.928
carA
Carbamoyl-phosphate synthase, small subunit; Identified by match to protein family HMM PF00186; Belongs to the CarA family.
  
 
 0.925
glnA
Glutamine synthetase, type I.
  
  
 
0.923
carB
Carbamoyl-phosphate synthase, large subunit; Belongs to the CarB family.
  
 
 0.923
Your Current Organism:
Rhodospirillum centenum
NCBI taxonomy Id: 414684
Other names: R. centenum SW, Rhodocista centenaria SW, Rhodospirillum centenum SW, Rhodospirillum centenum str. SW, Rhodospirillum centenum strain SW
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.