STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
RC1_1488Phage-related hypothetical protein. (158 aa)    
Predicted Functional Partners:
RC1_1489
Phage-related conserved hypothetical protein; Identified by match to protein family HMM PF07568.
       0.773
RC1_1490
Phage-related conserved hypothetical protein; Identified by match to protein family HMM PF01073 match to protein family HMM PF01370 match to protein family HMM PF02719 match to protein family HMM PF04321 match to protein family HMM PF07993.
       0.718
RC1_1491
Phage-related hypothetical protein; Identified by match to protein family HMM PF04290.
       0.541
RC1_1487
Phage-related hypothetical protein.
       0.532
Your Current Organism:
Rhodospirillum centenum
NCBI taxonomy Id: 414684
Other names: R. centenum SW, Rhodocista centenaria SW, Rhodospirillum centenum SW, Rhodospirillum centenum str. SW, Rhodospirillum centenum strain SW
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.