Export your current network:
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of proteins in your network
Browse interactions in tabular form:
| node1 | node2 | node1 annotation | node2 annotation | score |
| RC1_0441 | RC1_1721 | Conserved hypothetical protein; Identified by match to protein family HMM PF03814 match to protein family HMM TIGR00680. | Conserved hypothetical protein; Identified by match to protein family HMM PF00072 match to protein family HMM PF00196 match to protein family HMM PF04545. | 0.590 |
| RC1_0441 | RC1_1766 | Conserved hypothetical protein; Identified by match to protein family HMM PF03814 match to protein family HMM TIGR00680. | Conserved hypothetical protein. | 0.767 |
| RC1_0441 | RC1_2054 | Conserved hypothetical protein; Identified by match to protein family HMM PF03814 match to protein family HMM TIGR00680. | Conserved hypothetical protein; Identified by match to protein family HMM PF01432 match to protein family HMM TIGR00181. | 0.676 |
| RC1_0441 | RC1_2269 | Conserved hypothetical protein; Identified by match to protein family HMM PF03814 match to protein family HMM TIGR00680. | Response regulator receiver domain protein; Identified by match to protein family HMM PF00149. | 0.552 |
| RC1_0441 | RC1_2289 | Conserved hypothetical protein; Identified by match to protein family HMM PF03814 match to protein family HMM TIGR00680. | Conserved hypothetical protein; Identified by match to protein family HMM PF00072. | 0.713 |
| RC1_0441 | RC1_2290 | Conserved hypothetical protein; Identified by match to protein family HMM PF03814 match to protein family HMM TIGR00680. | Sensory box-containing diguanylate cyclase, putative; Identified by match to protein family HMM PF00128 match to protein family HMM PF02922 match to protein family HMM TIGR02100. | 0.655 |
| RC1_0441 | RC1_3880 | Conserved hypothetical protein; Identified by match to protein family HMM PF03814 match to protein family HMM TIGR00680. | Hypothetical protein; Identified by Glimmer2 putative. | 0.583 |
| RC1_1665 | RC1_1766 | HAMP domain protein; Identified by match to protein family HMM PF02545 match to protein family HMM TIGR00172. | Conserved hypothetical protein. | 0.704 |
| RC1_1665 | RC1_2054 | HAMP domain protein; Identified by match to protein family HMM PF02545 match to protein family HMM TIGR00172. | Conserved hypothetical protein; Identified by match to protein family HMM PF01432 match to protein family HMM TIGR00181. | 0.443 |
| RC1_1665 | RC1_2269 | HAMP domain protein; Identified by match to protein family HMM PF02545 match to protein family HMM TIGR00172. | Response regulator receiver domain protein; Identified by match to protein family HMM PF00149. | 0.437 |
| RC1_1665 | RC1_2290 | HAMP domain protein; Identified by match to protein family HMM PF02545 match to protein family HMM TIGR00172. | Sensory box-containing diguanylate cyclase, putative; Identified by match to protein family HMM PF00128 match to protein family HMM PF02922 match to protein family HMM TIGR02100. | 0.567 |
| RC1_1665 | RC1_3005 | HAMP domain protein; Identified by match to protein family HMM PF02545 match to protein family HMM TIGR00172. | Conserved hypothetical protein; Identified by match to protein family HMM PF00919 match to protein family HMM PF01938 match to protein family HMM PF04055 match to protein family HMM TIGR00089 match to protein family HMM TIGR01574. | 0.641 |
| RC1_1665 | RC1_3880 | HAMP domain protein; Identified by match to protein family HMM PF02545 match to protein family HMM TIGR00172. | Hypothetical protein; Identified by Glimmer2 putative. | 0.796 |
| RC1_1721 | RC1_0441 | Conserved hypothetical protein; Identified by match to protein family HMM PF00072 match to protein family HMM PF00196 match to protein family HMM PF04545. | Conserved hypothetical protein; Identified by match to protein family HMM PF03814 match to protein family HMM TIGR00680. | 0.590 |
| RC1_1721 | RC1_1766 | Conserved hypothetical protein; Identified by match to protein family HMM PF00072 match to protein family HMM PF00196 match to protein family HMM PF04545. | Conserved hypothetical protein. | 0.725 |
| RC1_1721 | RC1_2054 | Conserved hypothetical protein; Identified by match to protein family HMM PF00072 match to protein family HMM PF00196 match to protein family HMM PF04545. | Conserved hypothetical protein; Identified by match to protein family HMM PF01432 match to protein family HMM TIGR00181. | 0.478 |
| RC1_1721 | RC1_2269 | Conserved hypothetical protein; Identified by match to protein family HMM PF00072 match to protein family HMM PF00196 match to protein family HMM PF04545. | Response regulator receiver domain protein; Identified by match to protein family HMM PF00149. | 0.477 |
| RC1_1721 | RC1_2289 | Conserved hypothetical protein; Identified by match to protein family HMM PF00072 match to protein family HMM PF00196 match to protein family HMM PF04545. | Conserved hypothetical protein; Identified by match to protein family HMM PF00072. | 0.739 |
| RC1_1721 | RC1_2290 | Conserved hypothetical protein; Identified by match to protein family HMM PF00072 match to protein family HMM PF00196 match to protein family HMM PF04545. | Sensory box-containing diguanylate cyclase, putative; Identified by match to protein family HMM PF00128 match to protein family HMM PF02922 match to protein family HMM TIGR02100. | 0.581 |
| RC1_1721 | RC1_3005 | Conserved hypothetical protein; Identified by match to protein family HMM PF00072 match to protein family HMM PF00196 match to protein family HMM PF04545. | Conserved hypothetical protein; Identified by match to protein family HMM PF00919 match to protein family HMM PF01938 match to protein family HMM PF04055 match to protein family HMM TIGR00089 match to protein family HMM TIGR01574. | 0.597 |
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