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STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
RC1_1920Glycosyl transferase, family 39; Also called dolichyl-phosphate-mannose-protein mannosyltransferase; identified by match to protein family HMM PF01073 match to protein family HMM PF01370 match to protein family HMM PF04321 match to protein family HMM TIGR02197. (581 aa)    
Predicted Functional Partners:
RC1_1918
Glycosyl transferase, group 2 family protein.
 
  
 0.986
lpxB-2
lipid-A-disaccharide synthase, putative; Identified by match to protein family HMM PF04380.
 
     0.879
RC1_0152
Glycosyl transferase, group 2 family protein; Identified by match to protein family HMM PF00501.
 
  
 0.828
RC1_2495
Glycosyl transferase, group 2 family protein.
 
  
 0.817
RC1_1921
Endoribonuclease L-PSP, putative; Identified by match to protein family HMM PF01790 match to protein family HMM TIGR00544.
  
    0.728
htrB
Lipid A biosynthesis lauroyl acyltransferase, putative; Identified by match to protein family HMM PF01687 match to protein family HMM PF06574 match to protein family HMM TIGR00083.
 
   
 0.612
RC1_0150
Conserved hypothetical protein; Identified by match to protein family HMM PF01906.
 
  
 0.600
RC1_1917
TPR domain protein; Identified by match to protein family HMM PF03807 match to protein family HMM TIGR00112.
 
   
 0.581
RC1_0824
Glycosyl transferase family protein.
  
  
 0.564
fmt
methionyl-tRNA formyltransferase fmt; Attaches a formyl group to the free amino group of methionyl- tRNA(fMet). The formyl group appears to play a dual role in the initiator identity of N-formylmethionyl-tRNA by promoting its recognition by IF2 and preventing the misappropriation of this tRNA by the elongation apparatus; Belongs to the Fmt family.
  
  
 0.559
Your Current Organism:
Rhodospirillum centenum
NCBI taxonomy Id: 414684
Other names: R. centenum SW, Rhodocista centenaria SW, Rhodospirillum centenum SW, Rhodospirillum centenum str. SW, Rhodospirillum centenum strain SW
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.