Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
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rodARod shape-determining protein RodA (FtsW, Bacterial cell division membrane protein); Peptidoglycan polymerase that is essential for cell wall elongation; Belongs to the SEDS family. MrdB/RodA subfamily. (382 aa)    
Predicted Functional Partners:
mrdA
Penicillin-binding protein 2; Gene symbol synonym pbpA.Part of the rodA operon.
 
 0.997
mreC
Rod shape-determining protein MreC, putative; Involved in formation and maintenance of cell shape.
 
  
 0.970
ftsQ
Cell division protein FtsQ; Essential cell division protein; Belongs to the FtsQ/DivIB family. FtsQ subfamily.
  
 
 0.963
mreB
Rod shape-determining protein MreB (actin-like ATPase domain); Gene symbol synonyms envB rodY; identified by match to protein family HMM PF00378 match to protein family HMM PF00725 match to protein family HMM PF02737.
 
 
 
 0.944
ftsW
Cell division protein FtsW, putative; Identified by match to protein family HMM PF02491 match to protein family HMM TIGR01174; Belongs to the SEDS family.
 
  
0.939
mreD
Rod shape-determining protein MreD, putative.
 
  
 0.939
ftsI
Peptidoglycan synthetase FtsI; Gene symbol synonym pbpB.Also called penicillin-binding protein 3; identified by match to protein family HMM PF01225 match to protein family HMM PF02875 match to protein family HMM TIGR01082.
 
 
 0.936
murA
UDP-N-acetylglucosamine 1-carboxyvinyltransferase; Cell wall formation. Adds enolpyruvyl to UDP-N- acetylglucosamine; Belongs to the EPSP synthase family. MurA subfamily.
 
   
 0.923
ftsA
Cell division protein FtsA; Cell division protein that is involved in the assembly of the Z ring. May serve as a membrane anchor for the Z ring. Belongs to the FtsA/MreB family.
 
 
 0.920
murG
Undecaprenyl-PP-MurNAc-pentapeptide-UDPGlcNAc GlcNAc transferase; Cell wall formation. Catalyzes the transfer of a GlcNAc subunit on undecaprenyl-pyrophosphoryl-MurNAc-pentapeptide (lipid intermediate I) to form undecaprenyl-pyrophosphoryl-MurNAc- (pentapeptide)GlcNAc (lipid intermediate II); Belongs to the glycosyltransferase 28 family. MurG subfamily.
 
  
 0.904
Your Current Organism:
Rhodospirillum centenum
NCBI taxonomy Id: 414684
Other names: R. centenum SW, Rhodocista centenaria SW, Rhodospirillum centenum SW, Rhodospirillum centenum str. SW, Rhodospirillum centenum strain SW
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