STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
RC1_1981Conserved hypothetical protein; Identified by match to protein family HMM PF02632. (61 aa)    
Predicted Functional Partners:
hflC
HflC protein, putative; HflC and HflK could regulate a protease.
     
 0.605
hflK
HflK protein, putative; HflC and HflK could encode or regulate a protease.
     
 0.597
nnrE
YjeF family protein; Bifunctional enzyme that catalyzes the epimerization of the S- and R-forms of NAD(P)HX and the dehydration of the S-form of NAD(P)HX at the expense of ADP, which is converted to AMP. This allows the repair of both epimers of NAD(P)HX, a damaged form of NAD(P)H that is a result of enzymatic or heat-dependent hydration. Catalyzes the epimerization of the S- and R-forms of NAD(P)HX, a damaged form of NAD(P)H that is a result of enzymatic or heat-dependent hydration. This is a prerequisite for the S-specific NAD(P)H-hydrate dehydratase to allow the repair of both epim [...]
     
 0.577
RC1_1984
Mrp protein, putative; Binds and transfers iron-sulfur (Fe-S) clusters to target apoproteins. Can hydrolyze ATP; Belongs to the Mrp/NBP35 ATP-binding proteins family.
 
     0.541
fliO
Flagellar assembly protein FliO, putative.
  
     0.522
degP-2
Periplasmic serine protease, Do; [synonyms] protease Do; Belongs to the peptidase S1C family.
       0.512
RC1_1819
Conserved domain protein; Identified by match to protein family HMM PF02472.
  
     0.511
RC1_3115
Conserved hypothetical protein.
  
     0.474
RC1_0740
Heat resistant agglutinin 1, putative; Identified by match to protein family HMM PF00406 match to protein family HMM PF05191 match to protein family HMM TIGR01351.
  
     0.442
RC1_1504
Conserved hypothetical protein.
  
     0.417
Your Current Organism:
Rhodospirillum centenum
NCBI taxonomy Id: 414684
Other names: R. centenum SW, Rhodocista centenaria SW, Rhodospirillum centenum SW, Rhodospirillum centenum str. SW, Rhodospirillum centenum strain SW
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.