Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
RC1_1986Cystathionine gamma-synthase (CGS) (O-succinylhomoserine(Thiol)-lyase); Identified by match to protein family HMM PF04085 match to protein family HMM TIGR00219. (387 aa)    
Predicted Functional Partners:
cbs
Cystathionine beta-synthase; Identified by match to protein family HMM PF02491 match to protein family HMM PF06723 match to protein family HMM TIGR00904.
 
 0.997
cysK
Cysteine synthase A; O-acetylserine sulfhydrylase,O-acetylserine (Thiol)-lyase identified by match to protein family HMM PF01578 match to protein family HMM TIGR00353.
  
 0.970
sseA
3-mercaptopyruvate sulfurtransferase; [Synonyms] Rhodanese-like protein.
 
 
 0.924
metC
Cystathionine beta-lyase.
  
  
 
0.918
aatA
Aspartate aminotransferase A; Synonym identified by match to protein family HMM PF00593 match to protein family HMM PF07715.
  
 
 0.916
ilvE-2
Branched-chain-amino-acid aminotransferase, putative; Acts on leucine, isoleucine and valine. Belongs to the class-IV pyridoxal-phosphate-dependent aminotransferase family.
   
 0.914
RC1_0523
Cys.
  
  
 
0.911
ilvE
Branched-chain-amino-acid aminotransferase, putative; [Synonyms] Transaminase B.
   
 0.910
metG
methionyl-tRNA synthetase MetG; Is required not only for elongation of protein synthesis but also for the initiation of all mRNA translation through initiator tRNA(fMet) aminoacylation; Belongs to the class-I aminoacyl-tRNA synthetase family. MetG type 2B subfamily.
   
 
 0.907
trxB
Thioredoxin-disulfide reductase; Identified by match to protein family HMM PF01968 match to protein family HMM PF02538 match to protein family HMM PF05378.
   
 
 0.902
Your Current Organism:
Rhodospirillum centenum
NCBI taxonomy Id: 414684
Other names: R. centenum SW, Rhodocista centenaria SW, Rhodospirillum centenum SW, Rhodospirillum centenum str. SW, Rhodospirillum centenum strain SW
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